52 lines
2.5 KiB
Python
52 lines
2.5 KiB
Python
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import os
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import shutil
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def copy_last_file(source_base_dir, target_base_dir, modality):
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# 確保目標目錄存在
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os.makedirs(target_base_dir, exist_ok=True)
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# 按照病患資料夾名稱進行排序
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for patient_dir in sorted(os.listdir(source_base_dir)):
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patient_path = os.path.join(source_base_dir, patient_dir)
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if os.path.isdir(patient_path):
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# 按照日期資料夾名稱進行排序
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date_dirs = sorted(os.listdir(patient_path))
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for date_dir in date_dirs:
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date_path = os.path.join(patient_path, date_dir)
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if os.path.isdir(date_path):
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files = os.listdir(date_path)
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# 篩選出 .nii.gz 和 .warp.nii.gz 檔案
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nii_files = [f for f in files if f.endswith('.nii.gz')]
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warp_files = [f for f in files if f.endswith('.warp.nii.gz')]
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# 先選擇最後一個 .warp.nii.gz 檔案，如果沒有則選擇 .nii.gz 檔案
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if warp_files:
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warp_files.sort()
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last_file = warp_files[-1] # 選擇最後一個 .warp.nii.gz 檔案
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elif nii_files:
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nii_files.sort()
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last_file = nii_files[-1] # 選擇最後一個 .nii.gz 檔案
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else:
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print(f"No valid .nii.gz or .warp.nii.gz files found in {date_path}")
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continue
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last_file_path = os.path.join(date_path, last_file)
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# 根據模態重新命名文件
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new_file_name = f"{modality}_{patient_dir}.nii.gz"
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target_file_path = os.path.join(target_base_dir, new_file_name)
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# 複製文件到目標目錄
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shutil.copy2(last_file_path, target_file_path)
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print(f"Copied: {last_file_path} to {target_file_path}")
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# T1C 模態的處理
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source_base_dir_t1c = '/home/onlylian/sorted_modality_files/T1C'
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target_base_dir_t1c = '/home/onlylian/T1C_image_folder'
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copy_last_file(source_base_dir_t1c, target_base_dir_t1c, 'T1C')
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# CT+CTC 模態的處理
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source_base_dir_ctctc = '/home/onlylian/sorted_modality_files/CT+CTC'
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target_base_dir_ctctc = '/home/onlylian/CT+CTC_image_folder'
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copy_last_file(source_base_dir_ctctc, target_base_dir_ctctc, 'CT+CTC')
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