Furen Xiao
b6fa62a763
Add .gitignore, AGENTS.md, scripts directory, and src directory to initialize the repository.
23 lines
No EOL
738 B
Markdown
23 lines
No EOL
738 B
Markdown
# AGENTS.md
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## Environment
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This project uses a conda environment named `longitudinal` (Python 3.14).
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Activate with:
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```bash
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source /opt/conda/etc/profile.d/conda.sh && conda activate longitudinal
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```
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Key packages: torch 2.14 (+cu126), torchvision, numpy, scipy, pandas, scikit-learn, scikit-image, matplotlib, nibabel, SimpleITK.
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## Project
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Longitudinal (repeated-measures) analysis of medical imaging data. Repo is at an early stage — see README.md for any project notes.
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## Conventions
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- All Python commands must run inside the `longitudinal` conda environment.
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- GPU is available (CUDA 12.6); use `torch.device('cuda')` when appropriate.
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- No lint/test tooling is configured yet; run scripts directly with `python <script>`. |